Visualize log-FC estimated with differential nhood abundance testing on embedding of original single-cell dataset.

plotNhoodGraphDA(x, milo_res, alpha = 0.05, ...)

Arguments

x

A Milo object

milo_res

a data.frame of milo results

alpha

significance level for Spatial FDR (default: 0.05)

...

arguments to pass to plotNhoodGraph

Value

a ggplot object

Examples

NULL
#> NULL